CompChem-Database: compound details

CompChem-Database: details for selected entry

DB00125_s0_p7 (20)

Formula C₆H₁₅N₄O₂

MW 175.21

InChIKey ODKSFYDXXFIFQN-NXRARAPONA-O

Entry_Date 2023-09-01

Net_Charge 1

Number_Atoms 28

Number_Heavy_Atoms 12

Number_Rings 0

Number_Bonds 27

Rotat_Bonds 7

Unbranched_Chain 4

Chiral_Centers 1

ONatoms 6

HB_Donor 4

HB_Acceptor 2

OpenEye_HB_Donors 8

OpenEye_HB_Acceptors 2

Lipinski_HB_Donors 4

Lipinski_HB_Acceptors 6

Lipinski_Violations 0

XLogP3 0

XLogP -4.19

logP -0.6501

PSA 129.01

MR 46.7554

ABS 0.55

Solubility highly

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol 63.73304

PM7_Total_Energy_ev -2268.76588

PM7_Electronic_Energy_ev -13346.16417

PM7_Dipole_Debye 6.90573

PM7_Point_Group C1

PM7_HOMO_Energy_ev -13.303

PM7_LUMO_Energy_ev -3.141

PM7_COSMO_Area_square_ang 195.42

PM7_COSMO_Volue_cubic_ang 212.47

PM7_Electron_Affinity_ev 3.141

PM7_Ionization_Energy_ev 13.303

PM7_Energy_Gap_ev 10.162

PM7_Global_Hardness_ev 5.081

PM7_Global_Softness_ev 0.19681165124975397

PM7_Chemical_Potential_ev -8.222

PM7_Electronigativity_ev 8.222

PM7_Back_Donation_Energy_ev -1.27025

PM7_Electrophilicity_ev 6.652360165321787

OPENEYE_Name (2~{S})-5-[[amino(azaniumylidene)methyl]amino]-2-azaniumyl-pentanoate

SMILES C(=O)(C(CCCNC(=[NH2+])N)[NH3+])[O-]

Canonical_SMILES NC(=[NH2])NCCC[C@@H](C(=O)O)[NH3+]

InChI 1/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/p+1/fC6H15N4O2/h7,10H,8-9H2/q+1

InChI_3D 1S/C6H15N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4,10H,1-3,7-9H2,(H,11,12)/p+1/t4-/m0/s1

AuxInfo 1/1/N:3,4,5,6,1,2,9,7,8,10,11,12/E:(8,9)(11,12)/F:m/E:m/rA:27cCCCCCCN+NN+NOO-HHHHHHHHHHHHHHH/rB:;;s3;s3;s1s4;d2;s2;s6;s2s5;d1;s1;s3;s3;s4;s4;s5;s5;s6;s7;s8;s8;s9;s9;s10;s7;s9;/rC:;2.9641,-3.866,0;1.2321,-1.866,0;.366,-1.366,0;2.0981,-2.366,0;-.5,-.866,0;2.0981,-4.366,0;3.8301,-4.366,0;-1.366,-.366,0;2.9641,-2.866,0;1,0,0;-.5,.866,0;1.4821,-1.433,0;.9821,-2.299,0;.116,-1.799,0;.616,-.933,0;1.8481,-2.799,0;2.3481,-1.933,0;-.75,-1.299,0;1.6651,-4.116,0;3.8301,-4.866,0;4.2631,-4.116,0;-1.616,-.799,0;-1.116,.067,0;3.3971,-2.616,0;2.0981,-4.866,0;-1.799,-.116,0;

Duplicates DB00125_s0_p7;DB04027_s0_p7;DB13207_m1_s0_p7;DB13748_m2_s0_p7;DB15993_m2_s0_p7;DB16025_m1_s0_p7

mol2_Path /CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.mol2

pdbqt_Path /CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.pdbqt

sdf_Path /CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.sdf

Formula	C₆H₁₅N₄O₂
MW	175.21
InChIKey	ODKSFYDXXFIFQN-NXRARAPONA-O
Entry_Date	2023-09-01
Net_Charge	1
Number_Atoms	28
Number_Heavy_Atoms	12
Number_Rings	0
Number_Bonds	27
Rotat_Bonds	7
Unbranched_Chain	4
Chiral_Centers	1
ONatoms	6
HB_Donor	4
HB_Acceptor	2
OpenEye_HB_Donors	8
OpenEye_HB_Acceptors	2
Lipinski_HB_Donors	4
Lipinski_HB_Acceptors	6
Lipinski_Violations	0
XLogP3	0
XLogP	-4.19
logP	-0.6501
PSA	129.01
MR	46.7554
ABS	0.55
Solubility	highly
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	63.73304
PM7_Total_Energy_ev	-2268.76588
PM7_Electronic_Energy_ev	-13346.16417
PM7_Dipole_Debye	6.90573
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-13.303
PM7_LUMO_Energy_ev	-3.141
PM7_COSMO_Area_square_ang	195.42
PM7_COSMO_Volue_cubic_ang	212.47
PM7_Electron_Affinity_ev	3.141
PM7_Ionization_Energy_ev	13.303
PM7_Energy_Gap_ev	10.162
PM7_Global_Hardness_ev	5.081
PM7_Global_Softness_ev	0.19681165124975397
PM7_Chemical_Potential_ev	-8.222
PM7_Electronigativity_ev	8.222
PM7_Back_Donation_Energy_ev	-1.27025
PM7_Electrophilicity_ev	6.652360165321787
OPENEYE_Name	(2~{S})-5-[[amino(azaniumylidene)methyl]amino]-2-azaniumyl-pentanoate
SMILES	C(=O)(C(CCCNC(=[NH2+])N)[NH3+])[O-]
Canonical_SMILES	NC(=[NH2])NCCC[C@@H](C(=O)O)[NH3+]
InChI	1/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/p+1/fC6H15N4O2/h7,10H,8-9H2/q+1
InChI_3D	1S/C6H15N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4,10H,1-3,7-9H2,(H,11,12)/p+1/t4-/m0/s1
AuxInfo	1/1/N:3,4,5,6,1,2,9,7,8,10,11,12/E:(8,9)(11,12)/F:m/E:m/rA:27cCCCCCCN+NN+NOO-HHHHHHHHHHHHHHH/rB:;;s3;s3;s1s4;d2;s2;s6;s2s5;d1;s1;s3;s3;s4;s4;s5;s5;s6;s7;s8;s8;s9;s9;s10;s7;s9;/rC:;2.9641,-3.866,0;1.2321,-1.866,0;.366,-1.366,0;2.0981,-2.366,0;-.5,-.866,0;2.0981,-4.366,0;3.8301,-4.366,0;-1.366,-.366,0;2.9641,-2.866,0;1,0,0;-.5,.866,0;1.4821,-1.433,0;.9821,-2.299,0;.116,-1.799,0;.616,-.933,0;1.8481,-2.799,0;2.3481,-1.933,0;-.75,-1.299,0;1.6651,-4.116,0;3.8301,-4.866,0;4.2631,-4.116,0;-1.616,-.799,0;-1.116,.067,0;3.3971,-2.616,0;2.0981,-4.866,0;-1.799,-.116,0;
Duplicates	DB00125_s0_p7;DB04027_s0_p7;DB13207_m1_s0_p7;DB13748_m2_s0_p7;DB15993_m2_s0_p7;DB16025_m1_s0_p7
mol2_Path	/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.mol2
pdbqt_Path	/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.pdbqt
sdf_Path	/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000000000-0000000249/DB00125_s0_p7.sdf