CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI186425_s0_p0 (100960)

Formula C₂₆H₃₁N₃O₁₁S

MW 593.6

InChIKey SMEKQHXQDPRSBF-PYBVIEABNA-N

Entry_Date 2023-11-01

Net_Charge 0

Number_Atoms 72

Number_Heavy_Atoms 41

Number_Rings 3

Number_Bonds 74

Rotat_Bonds 20

Unbranched_Chain 2

Chiral_Centers 3

ONatoms 14

HB_Donor 6

HB_Acceptor 8

OpenEye_HB_Donors 7

OpenEye_HB_Acceptors 7

Lipinski_HB_Donors 6

Lipinski_HB_Acceptors 14

Lipinski_Violations 3

XLogP3 0

XLogP -3.98

logP 2.1505

PSA 256.93

MR 147.091

ABS 0.17

Solubility moderately

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -405.3747

PM7_Total_Energy_ev -7595.66901

PM7_Electronic_Energy_ev -77211.11807

PM7_Dipole_Debye 7.49674

PM7_Point_Group C1

PM7_HOMO_Energy_ev -9.014

PM7_LUMO_Energy_ev -1.177

PM7_COSMO_Area_square_ang 497.33

PM7_COSMO_Volue_cubic_ang 686.64

PM7_Electron_Affinity_ev 1.177

PM7_Ionization_Energy_ev 9.014

PM7_Energy_Gap_ev 7.837

PM7_Global_Hardness_ev 3.9185

PM7_Global_Softness_ev 0.2551996937603675

PM7_Chemical_Potential_ev -5.0955

PM7_Electronigativity_ev 5.0955

PM7_Back_Donation_Energy_ev -0.979625

PM7_Electrophilicity_ev 3.313017768278678

OPENEYE_Name (2~{R})-2-amino-5-[[(1~{S})-2-(carboxymethylamino)-1-[[(2~{S})-2-hydroxy-1,1-dimethyl-3-(7-oxofuro[3,2-g]chromen-4-yl)oxy-propyl]sulfanylmethyl]-2-oxo-ethyl]amino]-5-oxo-pentanoic acid

SMILES c1coc2c1c(c3c(c2)oc(=O)cc3)OCC(C(C)(C)SCC(C(=O)NCC(=O)O)NC(=O)CCC(C(=O)O)N)O

Canonical_SMILES OC(=O)CNC(=O)[C@H](NC(=O)CC[C@H](C(=O)O)N)CSC([C@H](COc1c2ccoc2cc2c1ccc(=O)o2)O)(C)C

InChI 1/C26H31N3O11S/c1-26(2,41-12-16(24(35)28-10-21(32)33)29-20(31)5-4-15(27)25(36)37)19(30)11-39-23-13-3-6-22(34)40-18(13)9-17-14(23)7-8-38-17/h3,6-9,15-16,19,30H,4-5,10-12,27H2,1-2H3,(H,28,35)(H,29,31)(H,32,33)(H,36,37)/f/h28-29,32,36H

InChI_3D 1S/C26H31N3O11S/c1-26(2,41-12-16(24(35)28-10-21(32)33)29-20(31)5-4-15(27)25(36)37)19(30)11-39-23-13-3-6-22(34)40-18(13)9-17-14(23)7-8-38-17/h3,6-9,15-16,19,30H,4-5,10-12,27H2,1-2H3,(H,28,35)(H,29,31)(H,32,33)(H,36,37)/t15-,16-,19+/m1/s1

AuxInfo 1/1/N:16,17,9,20,18,10,1,3,2,19,21,22,5,4,24,23,6,7,25,12,14,11,8,13,15,26,27,28,29,39,31,33,37,30,32,34,38,35,40,36,41/E:(1,2)(32,33)(36,37)/F:16,17,9,20,18,10,1,3,2,19,21,22,5,4,24,23,6,7,25,12,14,11,8,13,15,26,27,28,29,39,31,37,33,30,32,38,34,35,40,36,41/E:(1,2)/rA:72cCCCCCCCCCCCCCCCCCCCCCCCCCCNNNOOOOOOOOOOOSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:;d1;s1;;d2s4;s2d5;d4s5;s5;d9;s10;;;;;;;s12;s14;s18;;;s13s22;s15s20;s21;s16s17s25;s24;s13s19;s12s23;d11;d12;d13;d14;d15;s3s6;s7s11;s14;s15;s25;s8s21;s22s26;s1;s2;s3;s9;s10;s16;s16;s16;s17;s17;s17;s18;s18;s19;s19;s20;s20;s21;s21;s22;s22;s23;s24;s25;s27;s27;s28;s29;s37;s38;s39;/rC:4.4354,-.3289,0;2.6103,1.5028,0;5.0324,.4839,0;3.4778,-.0124,0;1.7424,-.0104,0;3.483,.9962,0;1.7427,.9968,0;2.6096,-.5114,0;.8635,-.5044,0;;.005,1.0056,0;3.2371,-6.3602,0;.6384,-6.8573,0;-1.0959,-8.8554,0;6.3358,-5.7297,0;-.4911,-2.8919,0;-.8587,-4.2575,0;4.1036,-5.8611,0;-.2293,-8.3563,0;4.9702,-5.3621,0;1.7411,-2.7604,0;1.006,-5.4917,0;1.505,-6.3582,0;5.8368,-4.8631,0;.8745,-3.2595,0;.0079,-3.7585,0;6.7034,-4.364,0;.6373,-7.8573,0;2.3716,-5.8592,0;-.8597,1.5079,0;3.2359,-7.3602,0;-.227,-6.3563,0;-1.9613,-8.3544,0;5.8349,-6.5951,0;4.4438,1.3027,0;.8737,1.5068,0;-1.097,-9.8554,0;7.3358,-5.7308,0;1.3735,-4.126,0;2.6076,-2.2614,0;.5069,-4.6251,0;4.5875,-.8052,0;2.6098,2.0028,0;5.5324,.4813,0;.8593,-1.0044,0;-.4343,-.2478,0;-.0578,-2.6424,0;-.9244,-3.1414,0;-.7406,-2.4586,0;-1.1082,-3.8242,0;-.6092,-4.6908,0;-1.292,-4.5071,0;4.3532,-6.2944,0;3.8541,-5.4279,0;-.4788,-7.923,0;.0202,-8.7896,0;5.2197,-5.7954,0;4.7207,-4.9288,0;1.9906,-3.1937,0;1.4916,-2.3271,0;1.4393,-5.2421,0;.5727,-5.7412,0;1.7545,-6.7915,0;5.5873,-4.4298,0;.625,-2.8262,0;7.1361,-4.6145,0;6.7039,-3.864,0;1.07,-8.1078,0;2.3721,-5.3592,0;-1.5303,-10.1049,0;7.5854,-6.1641,0;1.8735,-4.1266,0;

Duplicates ChEBI186425_s0_p0

mol2_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.sdf

Formula	C₂₆H₃₁N₃O₁₁S
MW	593.6
InChIKey	SMEKQHXQDPRSBF-PYBVIEABNA-N
Entry_Date	2023-11-01
Net_Charge	0
Number_Atoms	72
Number_Heavy_Atoms	41
Number_Rings	3
Number_Bonds	74
Rotat_Bonds	20
Unbranched_Chain	2
Chiral_Centers	3
ONatoms	14
HB_Donor	6
HB_Acceptor	8
OpenEye_HB_Donors	7
OpenEye_HB_Acceptors	7
Lipinski_HB_Donors	6
Lipinski_HB_Acceptors	14
Lipinski_Violations	3
XLogP3	0
XLogP	-3.98
logP	2.1505
PSA	256.93
MR	147.091
ABS	0.17
Solubility	moderately
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-405.3747
PM7_Total_Energy_ev	-7595.66901
PM7_Electronic_Energy_ev	-77211.11807
PM7_Dipole_Debye	7.49674
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-9.014
PM7_LUMO_Energy_ev	-1.177
PM7_COSMO_Area_square_ang	497.33
PM7_COSMO_Volue_cubic_ang	686.64
PM7_Electron_Affinity_ev	1.177
PM7_Ionization_Energy_ev	9.014
PM7_Energy_Gap_ev	7.837
PM7_Global_Hardness_ev	3.9185
PM7_Global_Softness_ev	0.2551996937603675
PM7_Chemical_Potential_ev	-5.0955
PM7_Electronigativity_ev	5.0955
PM7_Back_Donation_Energy_ev	-0.979625
PM7_Electrophilicity_ev	3.313017768278678
OPENEYE_Name	(2~{R})-2-amino-5-[[(1~{S})-2-(carboxymethylamino)-1-[[(2~{S})-2-hydroxy-1,1-dimethyl-3-(7-oxofuro[3,2-g]chromen-4-yl)oxy-propyl]sulfanylmethyl]-2-oxo-ethyl]amino]-5-oxo-pentanoic acid
SMILES	c1coc2c1c(c3c(c2)oc(=O)cc3)OCC(C(C)(C)SCC(C(=O)NCC(=O)O)NC(=O)CCC(C(=O)O)N)O
Canonical_SMILES	OC(=O)CNC(=O)[C@H](NC(=O)CC[C@H](C(=O)O)N)CSC([C@H](COc1c2ccoc2cc2c1ccc(=O)o2)O)(C)C
InChI	1/C26H31N3O11S/c1-26(2,41-12-16(24(35)28-10-21(32)33)29-20(31)5-4-15(27)25(36)37)19(30)11-39-23-13-3-6-22(34)40-18(13)9-17-14(23)7-8-38-17/h3,6-9,15-16,19,30H,4-5,10-12,27H2,1-2H3,(H,28,35)(H,29,31)(H,32,33)(H,36,37)/f/h28-29,32,36H
InChI_3D	1S/C26H31N3O11S/c1-26(2,41-12-16(24(35)28-10-21(32)33)29-20(31)5-4-15(27)25(36)37)19(30)11-39-23-13-3-6-22(34)40-18(13)9-17-14(23)7-8-38-17/h3,6-9,15-16,19,30H,4-5,10-12,27H2,1-2H3,(H,28,35)(H,29,31)(H,32,33)(H,36,37)/t15-,16-,19+/m1/s1
AuxInfo	1/1/N:16,17,9,20,18,10,1,3,2,19,21,22,5,4,24,23,6,7,25,12,14,11,8,13,15,26,27,28,29,39,31,33,37,30,32,34,38,35,40,36,41/E:(1,2)(32,33)(36,37)/F:16,17,9,20,18,10,1,3,2,19,21,22,5,4,24,23,6,7,25,12,14,11,8,13,15,26,27,28,29,39,31,37,33,30,32,38,34,35,40,36,41/E:(1,2)/rA:72cCCCCCCCCCCCCCCCCCCCCCCCCCCNNNOOOOOOOOOOOSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:;d1;s1;;d2s4;s2d5;d4s5;s5;d9;s10;;;;;;;s12;s14;s18;;;s13s22;s15s20;s21;s16s17s25;s24;s13s19;s12s23;d11;d12;d13;d14;d15;s3s6;s7s11;s14;s15;s25;s8s21;s22s26;s1;s2;s3;s9;s10;s16;s16;s16;s17;s17;s17;s18;s18;s19;s19;s20;s20;s21;s21;s22;s22;s23;s24;s25;s27;s27;s28;s29;s37;s38;s39;/rC:4.4354,-.3289,0;2.6103,1.5028,0;5.0324,.4839,0;3.4778,-.0124,0;1.7424,-.0104,0;3.483,.9962,0;1.7427,.9968,0;2.6096,-.5114,0;.8635,-.5044,0;;.005,1.0056,0;3.2371,-6.3602,0;.6384,-6.8573,0;-1.0959,-8.8554,0;6.3358,-5.7297,0;-.4911,-2.8919,0;-.8587,-4.2575,0;4.1036,-5.8611,0;-.2293,-8.3563,0;4.9702,-5.3621,0;1.7411,-2.7604,0;1.006,-5.4917,0;1.505,-6.3582,0;5.8368,-4.8631,0;.8745,-3.2595,0;.0079,-3.7585,0;6.7034,-4.364,0;.6373,-7.8573,0;2.3716,-5.8592,0;-.8597,1.5079,0;3.2359,-7.3602,0;-.227,-6.3563,0;-1.9613,-8.3544,0;5.8349,-6.5951,0;4.4438,1.3027,0;.8737,1.5068,0;-1.097,-9.8554,0;7.3358,-5.7308,0;1.3735,-4.126,0;2.6076,-2.2614,0;.5069,-4.6251,0;4.5875,-.8052,0;2.6098,2.0028,0;5.5324,.4813,0;.8593,-1.0044,0;-.4343,-.2478,0;-.0578,-2.6424,0;-.9244,-3.1414,0;-.7406,-2.4586,0;-1.1082,-3.8242,0;-.6092,-4.6908,0;-1.292,-4.5071,0;4.3532,-6.2944,0;3.8541,-5.4279,0;-.4788,-7.923,0;.0202,-8.7896,0;5.2197,-5.7954,0;4.7207,-4.9288,0;1.9906,-3.1937,0;1.4916,-2.3271,0;1.4393,-5.2421,0;.5727,-5.7412,0;1.7545,-6.7915,0;5.5873,-4.4298,0;.625,-2.8262,0;7.1361,-4.6145,0;6.7039,-3.864,0;1.07,-8.1078,0;2.3721,-5.3592,0;-1.5303,-10.1049,0;7.5854,-6.1641,0;1.8735,-4.1266,0;
Duplicates	ChEBI186425_s0_p0
mol2_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000186250-0000186499/ChEBI186425_s0_p0.sdf