CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI187193_s0_p7 (101636)

Formula C₃₀H₅₂NO₁₃P

MW 665.71

InChIKey PBKDABDYVMIXNI-NMTCMDMDNA-L

Entry_Date 2023-11-01

Net_Charge -2

Number_Atoms 100

Number_Heavy_Atoms 45

Number_Rings 0

Number_Bonds 99

Rotat_Bonds 36

Unbranched_Chain 15

Chiral_Centers 3

ONatoms 14

HB_Donor 5

HB_Acceptor 9

OpenEye_HB_Donors 4

OpenEye_HB_Acceptors 9

Lipinski_HB_Donors 2

Lipinski_HB_Acceptors 14

Lipinski_Violations 2

XLogP3 0

XLogP 2.57

logP 3.9234

PSA 240.64

MR 169.086

ABS 0.17

Solubility soluble

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -751.8448

PM7_Total_Energy_ev -8595.40123

PM7_Electronic_Energy_ev -96581.9074

PM7_Dipole_Debye 24.09814

PM7_Point_Group C1

PM7_HOMO_Energy_ev -3.555

PM7_LUMO_Energy_ev 4.221

PM7_COSMO_Area_square_ang 593.01

PM7_COSMO_Volue_cubic_ang 863.85

PM7_Electron_Affinity_ev -4.221

PM7_Ionization_Energy_ev 3.555

PM7_Energy_Gap_ev 7.776

PM7_Global_Hardness_ev 3.888

PM7_Global_Softness_ev 0.257201646090535

PM7_Chemical_Potential_ev 0.333

PM7_Electronigativity_ev -0.333

PM7_Back_Donation_Energy_ev -0.972

PM7_Electrophilicity_ev 0.014260416666666666

OPENEYE_Name (~{E},4~{R})-8-[(1~{R})-1-[[[(2~{S})-2-azaniumyl-2-carboxylato-ethoxy]-oxido-phosphoryl]oxymethyl]-2-hexadecanoyloxy-ethoxy]-4-hydroxy-8-oxo-oct-2-enoate

SMILES C(=CC(CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCC)COP(=O)([O-])OCC(C(=O)[O-])[NH3+])O)C(=O)[O-]

Canonical_SMILES CCCCCCCCCCCCCCCC(=O)OC[C@@H](OC(=O)CCC[C@H](/C=C/C(=O)O)O)CO[P@](=O)(OC[C@@H](C(=O)O)[NH3+])O

InChI 1/C30H54NO13P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-17-28(35)41-21-25(22-42-45(39,40)43-23-26(31)30(37)38)44-29(36)18-15-16-24(32)19-20-27(33)34/h19-20,24-26,32H,2-18,21-23,31H2,1H3,(H,33,34)(H,37,38)(H,39,40)/p-2/fC30H52NO13P/h31H/q-2

InChI_3D 1S/C30H54NO13P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-17-28(35)41-21-25(22-42-45(39,40)43-23-26(31)30(37)38)44-29(36)18-15-16-24(32)19-20-27(33)34/h19-20,24-26,32H,2-18,21-23,31H2,1H3,(H,33,34)(H,37,38)(H,39,40)/p+1/b20-19+/t24-,25-,26+/m1/s1

AuxInfo 1/1/N:7,10,13,15,17,19,21,23,22,20,18,16,14,11,12,24,8,9,2,1,26,27,25,28,30,29,3,4,5,6,31,39,32,37,33,34,35,38,36,40,41,44,43,42,45/E:(33,34)(37,38)(39,40)/F:m/E:m/rA:97cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCN+OOOOOO-O-OO-OOOOPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:w1;s1;;;;;s4;s5;s7;s8;s9;s10;s11;s13;s14;s15;s16;s17;s18;s19;s20;s21s22;s12;;;;s2s24;s6s25;s26s27;s29;d3;d4;d5;d6;;s3;s6;s28;;s4s26;s5s30;s25;s27;d36s40s43s44;s1;s2;s7;s7;s7;s8;s8;s9;s9;s10;s10;s11;s11;s12;s12;s13;s13;s14;s14;s15;s15;s16;s16;s17;s17;s18;s18;s19;s19;s20;s20;s21;s21;s22;s22;s23;s23;s24;s24;s25;s25;s26;s26;s27;s27;s28;s29;s30;s31;s31;s39;s31;/rC:;-.5,-.866,0;-.5,.866,0;1.7679,-8.0622,0;2,-5.1962,0;8.1962,-2.1962,0;-11.2224,-15.5622,0;.9019,-8.5622,0;1.5,-4.3301,0;-10.3564,-15.0622,0;.0359,-9.0622,0;1,-3.4641,0;-9.4904,-14.5622,0;-.8301,-9.5622,0;-8.6244,-14.0622,0;-1.6962,-10.0622,0;-7.7583,-13.5622,0;-2.5622,-10.5622,0;-6.8923,-13.0622,0;-3.4282,-11.0622,0;-6.0263,-12.5622,0;-4.2942,-11.5622,0;-5.1603,-12.0622,0;.5,-2.5981,0;7.8301,-3.5622,0;2.634,-6.5622,0;4.366,-5.5622,0;0,-1.7321,0;8.6962,-3.0622,0;3.5,-6.0622,0;9.5622,-2.5622,0;-1.5,.866,0;2.634,-8.5622,0;1.5,-6.0622,0;7.1962,-2.1962,0;5.5981,-3.6962,0;0,1.7321,0;8.6962,-1.3301,0;-.866,-2.2321,0;6.5981,-5.4282,0;1.7679,-7.0622,0;3,-5.1962,0;6.9641,-4.0622,0;5.2321,-5.0622,0;6.0981,-4.5622,0;.5,0,0;-1,-.866,0;-10.9724,-15.9952,0;-11.4724,-15.1292,0;-11.6554,-15.8122,0;1.1519,-8.9952,0;.6519,-8.1292,0;1.067,-4.5801,0;1.933,-4.0801,0;-10.6064,-14.6292,0;-10.1064,-15.4952,0;.2859,-9.4952,0;-.2141,-8.6292,0;.567,-3.7141,0;1.433,-3.2141,0;-9.7404,-14.1292,0;-9.2404,-14.9952,0;-.5801,-9.9952,0;-1.0801,-9.1292,0;-8.8744,-13.6292,0;-8.3744,-14.4952,0;-1.4462,-10.4952,0;-1.9462,-9.6292,0;-8.0083,-13.1292,0;-7.5083,-13.9952,0;-2.3122,-10.9952,0;-2.8122,-10.1292,0;-7.1423,-12.6292,0;-6.6423,-13.4952,0;-3.1782,-11.4952,0;-3.6782,-10.6292,0;-6.2763,-12.1292,0;-5.7763,-12.9952,0;-4.0442,-11.9952,0;-4.5442,-11.1292,0;-5.4103,-11.6292,0;-4.9103,-12.4952,0;.067,-2.8481,0;.933,-2.3481,0;8.0801,-3.9952,0;7.5801,-3.1292,0;2.884,-6.9952,0;2.384,-6.1292,0;4.116,-5.1292,0;4.616,-5.9952,0;.433,-1.4821,0;8.9462,-3.4952,0;3.75,-6.4952,0;9.8122,-2.9952,0;9.3122,-2.1292,0;-1.299,-1.9821,0;9.9952,-2.3122,0;

Duplicates ChEBI187193_s0_p7

mol2_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.sdf

Formula	C₃₀H₅₂NO₁₃P
MW	665.71
InChIKey	PBKDABDYVMIXNI-NMTCMDMDNA-L
Entry_Date	2023-11-01
Net_Charge	-2
Number_Atoms	100
Number_Heavy_Atoms	45
Number_Rings	0
Number_Bonds	99
Rotat_Bonds	36
Unbranched_Chain	15
Chiral_Centers	3
ONatoms	14
HB_Donor	5
HB_Acceptor	9
OpenEye_HB_Donors	4
OpenEye_HB_Acceptors	9
Lipinski_HB_Donors	2
Lipinski_HB_Acceptors	14
Lipinski_Violations	2
XLogP3	0
XLogP	2.57
logP	3.9234
PSA	240.64
MR	169.086
ABS	0.17
Solubility	soluble
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-751.8448
PM7_Total_Energy_ev	-8595.40123
PM7_Electronic_Energy_ev	-96581.9074
PM7_Dipole_Debye	24.09814
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-3.555
PM7_LUMO_Energy_ev	4.221
PM7_COSMO_Area_square_ang	593.01
PM7_COSMO_Volue_cubic_ang	863.85
PM7_Electron_Affinity_ev	-4.221
PM7_Ionization_Energy_ev	3.555
PM7_Energy_Gap_ev	7.776
PM7_Global_Hardness_ev	3.888
PM7_Global_Softness_ev	0.257201646090535
PM7_Chemical_Potential_ev	0.333
PM7_Electronigativity_ev	-0.333
PM7_Back_Donation_Energy_ev	-0.972
PM7_Electrophilicity_ev	0.014260416666666666
OPENEYE_Name	(~{E},4~{R})-8-[(1~{R})-1-[[[(2~{S})-2-azaniumyl-2-carboxylato-ethoxy]-oxido-phosphoryl]oxymethyl]-2-hexadecanoyloxy-ethoxy]-4-hydroxy-8-oxo-oct-2-enoate
SMILES	C(=CC(CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCC)COP(=O)([O-])OCC(C(=O)[O-])[NH3+])O)C(=O)[O-]
Canonical_SMILES	CCCCCCCCCCCCCCCC(=O)OC[C@@H](OC(=O)CCC[C@H](/C=C/C(=O)O)O)CO[P@](=O)(OC[C@@H](C(=O)O)[NH3+])O
InChI	1/C30H54NO13P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-17-28(35)41-21-25(22-42-45(39,40)43-23-26(31)30(37)38)44-29(36)18-15-16-24(32)19-20-27(33)34/h19-20,24-26,32H,2-18,21-23,31H2,1H3,(H,33,34)(H,37,38)(H,39,40)/p-2/fC30H52NO13P/h31H/q-2
InChI_3D	1S/C30H54NO13P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-17-28(35)41-21-25(22-42-45(39,40)43-23-26(31)30(37)38)44-29(36)18-15-16-24(32)19-20-27(33)34/h19-20,24-26,32H,2-18,21-23,31H2,1H3,(H,33,34)(H,37,38)(H,39,40)/p+1/b20-19+/t24-,25-,26+/m1/s1
AuxInfo	1/1/N:7,10,13,15,17,19,21,23,22,20,18,16,14,11,12,24,8,9,2,1,26,27,25,28,30,29,3,4,5,6,31,39,32,37,33,34,35,38,36,40,41,44,43,42,45/E:(33,34)(37,38)(39,40)/F:m/E:m/rA:97cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCN+OOOOOO-O-OO-OOOOPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:w1;s1;;;;;s4;s5;s7;s8;s9;s10;s11;s13;s14;s15;s16;s17;s18;s19;s20;s21s22;s12;;;;s2s24;s6s25;s26s27;s29;d3;d4;d5;d6;;s3;s6;s28;;s4s26;s5s30;s25;s27;d36s40s43s44;s1;s2;s7;s7;s7;s8;s8;s9;s9;s10;s10;s11;s11;s12;s12;s13;s13;s14;s14;s15;s15;s16;s16;s17;s17;s18;s18;s19;s19;s20;s20;s21;s21;s22;s22;s23;s23;s24;s24;s25;s25;s26;s26;s27;s27;s28;s29;s30;s31;s31;s39;s31;/rC:;-.5,-.866,0;-.5,.866,0;1.7679,-8.0622,0;2,-5.1962,0;8.1962,-2.1962,0;-11.2224,-15.5622,0;.9019,-8.5622,0;1.5,-4.3301,0;-10.3564,-15.0622,0;.0359,-9.0622,0;1,-3.4641,0;-9.4904,-14.5622,0;-.8301,-9.5622,0;-8.6244,-14.0622,0;-1.6962,-10.0622,0;-7.7583,-13.5622,0;-2.5622,-10.5622,0;-6.8923,-13.0622,0;-3.4282,-11.0622,0;-6.0263,-12.5622,0;-4.2942,-11.5622,0;-5.1603,-12.0622,0;.5,-2.5981,0;7.8301,-3.5622,0;2.634,-6.5622,0;4.366,-5.5622,0;0,-1.7321,0;8.6962,-3.0622,0;3.5,-6.0622,0;9.5622,-2.5622,0;-1.5,.866,0;2.634,-8.5622,0;1.5,-6.0622,0;7.1962,-2.1962,0;5.5981,-3.6962,0;0,1.7321,0;8.6962,-1.3301,0;-.866,-2.2321,0;6.5981,-5.4282,0;1.7679,-7.0622,0;3,-5.1962,0;6.9641,-4.0622,0;5.2321,-5.0622,0;6.0981,-4.5622,0;.5,0,0;-1,-.866,0;-10.9724,-15.9952,0;-11.4724,-15.1292,0;-11.6554,-15.8122,0;1.1519,-8.9952,0;.6519,-8.1292,0;1.067,-4.5801,0;1.933,-4.0801,0;-10.6064,-14.6292,0;-10.1064,-15.4952,0;.2859,-9.4952,0;-.2141,-8.6292,0;.567,-3.7141,0;1.433,-3.2141,0;-9.7404,-14.1292,0;-9.2404,-14.9952,0;-.5801,-9.9952,0;-1.0801,-9.1292,0;-8.8744,-13.6292,0;-8.3744,-14.4952,0;-1.4462,-10.4952,0;-1.9462,-9.6292,0;-8.0083,-13.1292,0;-7.5083,-13.9952,0;-2.3122,-10.9952,0;-2.8122,-10.1292,0;-7.1423,-12.6292,0;-6.6423,-13.4952,0;-3.1782,-11.4952,0;-3.6782,-10.6292,0;-6.2763,-12.1292,0;-5.7763,-12.9952,0;-4.0442,-11.9952,0;-4.5442,-11.1292,0;-5.4103,-11.6292,0;-4.9103,-12.4952,0;.067,-2.8481,0;.933,-2.3481,0;8.0801,-3.9952,0;7.5801,-3.1292,0;2.884,-6.9952,0;2.384,-6.1292,0;4.116,-5.1292,0;4.616,-5.9952,0;.433,-1.4821,0;8.9462,-3.4952,0;3.75,-6.4952,0;9.8122,-2.9952,0;9.3122,-2.1292,0;-1.299,-1.9821,0;9.9952,-2.3122,0;
Duplicates	ChEBI187193_s0_p7
mol2_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000187000-0000187249/ChEBI187193_s0_p7.sdf