CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI40721_p7 (12937)

Formula C₁₀H₁₂N₅O₇P

MW 345.21

InChIKey UDMBCSSLTHHNCD-QGRSLHCONA-L

Entry_Date 2023-11-01

Net_Charge -2

Number_Atoms 37

Number_Heavy_Atoms 23

Number_Rings 3

Number_Bonds 39

Rotat_Bonds 8

Unbranched_Chain 2

Chiral_Centers 4

ONatoms 12

HB_Donor 5

HB_Acceptor 8

OpenEye_HB_Donors 4

OpenEye_HB_Acceptors 9

Lipinski_HB_Donors 3

Lipinski_HB_Acceptors 12

Lipinski_Violations 1

XLogP3 0

XLogP -4.13

logP -1.2818

PSA 195.88

MR 73.5841

ABS 0.11

Solubility highly

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -283.65766

PM7_Total_Energy_ev -4565.99199

PM7_Electronic_Energy_ev -30843.61091

PM7_Dipole_Debye 31.93325

PM7_Point_Group C1

PM7_HOMO_Energy_ev -0.659

PM7_LUMO_Energy_ev 3.455

PM7_COSMO_Area_square_ang 298.52

PM7_COSMO_Volue_cubic_ang 336.36

PM7_Electron_Affinity_ev -3.455

PM7_Ionization_Energy_ev 0.659

PM7_Energy_Gap_ev 4.114

PM7_Global_Hardness_ev 2.057

PM7_Global_Softness_ev 0.48614487117160915

PM7_Chemical_Potential_ev 1.398

PM7_Electronigativity_ev -1.398

PM7_Back_Donation_Energy_ev -0.51425

PM7_Electrophilicity_ev 0.4750617403986388

OPENEYE_Name [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methyl phosphate

SMILES c1nc2c(n1C3C(C(C(O3)COP(=O)([O-])[O-])O)O)ncnc2N

Canonical_SMILES O[C@@H]1[C@H](O)[C@H](O[C@H]1n1cnc2c1ncnc2N)COP(=O)(O)O

InChI 1/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/p-2/fC10H12N5O7P/h11H2/q-2

InChI_3D 1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1

AuxInfo 1/1/N:10,2,1,8,3,6,7,5,4,9,15,14,12,11,13,18,19,16,20,21,22,17,23/E:(18,19,20)/F:m/E:m/rA:35cCCCCCCCCCCNNNNNOOOOO-O-OPHHHHHHHHHHHH/rB:;;d3;s3;;s6;s6;s7;s8;d1s3;d2s4;s1s4s9;s2d5;s5;;s8s9;s6;s7;;;s10;d16s20s21s22;s1;s2;s6;s7;s8;s9;s10;s10;s15;s15;s18;s19;/rC:2.4178,-1.0115,0;-.868,-1.5137,0;.868,-.5079,0;.868,-1.515,0;;3.2201,-3.9826,0;2.2408,-3.7733,0;3.7188,-3.1159,0;2.1348,-2.7774,0;4.8931,-1.8184,0;1.8258,-.1969,0;0,-2.0116,0;1.8258,-1.8263,0;-.868,-.5079,0;0,1,0;6.9061,.406,0;3.0528,-2.3694,0;2.679,-5.6469,0;.4908,-3.7742,0;5.4937,.3355,0;6.9765,-1.0065,0;5.5641,-1.0769,0;6.2351,-.3355,0;2.9178,-1.0115,0;-1.3007,-1.7643,0;3.677,-4.1857,0;2.1883,-4.2706,0;4.1232,-3.41,0;1.6458,-2.8816,0;5.2638,-2.1539,0;4.5223,-1.4829,0;-.433,1.25,0;.433,1.25,0;3.0134,-6.0185,0;.241,-4.2073,0;

Duplicates ChEBI40721_p7;ChEBI81690_m1

mol2_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.sdf

Formula	C₁₀H₁₂N₅O₇P
MW	345.21
InChIKey	UDMBCSSLTHHNCD-QGRSLHCONA-L
Entry_Date	2023-11-01
Net_Charge	-2
Number_Atoms	37
Number_Heavy_Atoms	23
Number_Rings	3
Number_Bonds	39
Rotat_Bonds	8
Unbranched_Chain	2
Chiral_Centers	4
ONatoms	12
HB_Donor	5
HB_Acceptor	8
OpenEye_HB_Donors	4
OpenEye_HB_Acceptors	9
Lipinski_HB_Donors	3
Lipinski_HB_Acceptors	12
Lipinski_Violations	1
XLogP3	0
XLogP	-4.13
logP	-1.2818
PSA	195.88
MR	73.5841
ABS	0.11
Solubility	highly
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-283.65766
PM7_Total_Energy_ev	-4565.99199
PM7_Electronic_Energy_ev	-30843.61091
PM7_Dipole_Debye	31.93325
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-0.659
PM7_LUMO_Energy_ev	3.455
PM7_COSMO_Area_square_ang	298.52
PM7_COSMO_Volue_cubic_ang	336.36
PM7_Electron_Affinity_ev	-3.455
PM7_Ionization_Energy_ev	0.659
PM7_Energy_Gap_ev	4.114
PM7_Global_Hardness_ev	2.057
PM7_Global_Softness_ev	0.48614487117160915
PM7_Chemical_Potential_ev	1.398
PM7_Electronigativity_ev	-1.398
PM7_Back_Donation_Energy_ev	-0.51425
PM7_Electrophilicity_ev	0.4750617403986388
OPENEYE_Name	[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methyl phosphate
SMILES	c1nc2c(n1C3C(C(C(O3)COP(=O)([O-])[O-])O)O)ncnc2N
Canonical_SMILES	O[C@@H]1[C@H](O)[C@H](O[C@H]1n1cnc2c1ncnc2N)COP(=O)(O)O
InChI	1/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/p-2/fC10H12N5O7P/h11H2/q-2
InChI_3D	1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
AuxInfo	1/1/N:10,2,1,8,3,6,7,5,4,9,15,14,12,11,13,18,19,16,20,21,22,17,23/E:(18,19,20)/F:m/E:m/rA:35cCCCCCCCCCCNNNNNOOOOO-O-OPHHHHHHHHHHHH/rB:;;d3;s3;;s6;s6;s7;s8;d1s3;d2s4;s1s4s9;s2d5;s5;;s8s9;s6;s7;;;s10;d16s20s21s22;s1;s2;s6;s7;s8;s9;s10;s10;s15;s15;s18;s19;/rC:2.4178,-1.0115,0;-.868,-1.5137,0;.868,-.5079,0;.868,-1.515,0;;3.2201,-3.9826,0;2.2408,-3.7733,0;3.7188,-3.1159,0;2.1348,-2.7774,0;4.8931,-1.8184,0;1.8258,-.1969,0;0,-2.0116,0;1.8258,-1.8263,0;-.868,-.5079,0;0,1,0;6.9061,.406,0;3.0528,-2.3694,0;2.679,-5.6469,0;.4908,-3.7742,0;5.4937,.3355,0;6.9765,-1.0065,0;5.5641,-1.0769,0;6.2351,-.3355,0;2.9178,-1.0115,0;-1.3007,-1.7643,0;3.677,-4.1857,0;2.1883,-4.2706,0;4.1232,-3.41,0;1.6458,-2.8816,0;5.2638,-2.1539,0;4.5223,-1.4829,0;-.433,1.25,0;.433,1.25,0;3.0134,-6.0185,0;.241,-4.2073,0;
Duplicates	ChEBI40721_p7;ChEBI81690_m1
mol2_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000040500-0000040749/ChEBI40721_p7.sdf