CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI44642 (13413)

Formula C₁₀H₁₅N₂O₉P

MW 338.21

InChIKey FHMMECZNEPGJSJ-KRKNQDLHNA-N

Entry_Date 2023-11-01

Net_Charge 0

Number_Atoms 37

Number_Heavy_Atoms 22

Number_Rings 2

Number_Bonds 38

Rotat_Bonds 8

Unbranched_Chain 2

Chiral_Centers 4

ONatoms 11

HB_Donor 4

HB_Acceptor 6

OpenEye_HB_Donors 4

OpenEye_HB_Acceptors 6

Lipinski_HB_Donors 4

Lipinski_HB_Acceptors 11

Lipinski_Violations 1

XLogP3 0

XLogP -2.6

logP -2.0808

PSA 170.12

MR 69.9096

ABS 0.55

Solubility highly

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -418.52614

PM7_Total_Energy_ev -4639.29358

PM7_Electronic_Energy_ev -31730.2471

PM7_Dipole_Debye 8.01907

PM7_Point_Group C1

PM7_HOMO_Energy_ev -9.859

PM7_LUMO_Energy_ev -0.602

PM7_COSMO_Area_square_ang 301.93

PM7_COSMO_Volue_cubic_ang 344.34

PM7_Electron_Affinity_ev 0.602

PM7_Ionization_Energy_ev 9.859

PM7_Energy_Gap_ev 9.257

PM7_Global_Hardness_ev 4.6285

PM7_Global_Softness_ev 0.21605271686291455

PM7_Chemical_Potential_ev -5.2305

PM7_Electronigativity_ev 5.2305

PM7_Back_Donation_Energy_ev -1.157125

PM7_Electrophilicity_ev 2.955399184400994

OPENEYE_Name [(2~{R},3~{R},4~{R},5~{R})-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-4-methoxy-tetrahydrofuran-2-yl]methyl dihydrogen phosphate

SMILES c1cn(c(=O)[nH]c1=O)C2C(C(C(O2)COP(=O)(O)O)O)OC

Canonical_SMILES CO[C@@H]1[C@H](O)[C@H](O[C@H]1n1ccc(=O)[nH]c1=O)COP(=O)(O)O

InChI 1/C10H15N2O9P/c1-19-8-7(14)5(4-20-22(16,17)18)21-9(8)12-3-2-6(13)11-10(12)15/h2-3,5,7-9,14H,4H2,1H3,(H,11,13,15)(H2,16,17,18)/f/h11,16-17H

InChI_3D 1S/C10H15N2O9P/c1-19-8-7(14)5(4-20-22(16,17)18)21-9(8)12-3-2-6(13)11-10(12)15/h2-3,5,7-9,14H,4H2,1H3,(H,11,13,15)(H2,16,17,18)/t5-,7-,8-,9-/m1/s1

AuxInfo 1/1/N:9,1,2,10,7,3,5,6,8,4,11,12,13,17,14,15,18,19,20,21,16,22/E:(16,17,18)/F:9,1,2,10,7,3,5,6,8,4,11,12,13,17,14,18,19,15,20,21,16,22/E:(16,17)/rA:37cCCCCCCCCCCNNOOOOOOOOOPHHHHHHHHHHHHHHH/rB:d1;s1;;;s5;s5;s6;;s7;s3s4;s2s4s8;d3;d4;;s7s8;s5;;;s6s9;s10;d15s18s19s21;s1;s2;s5;s6;s7;s8;s9;s9;s9;s10;s10;s11;s17;s18;s19;/rC:;0,1.0051,0;.8674,-.4976,0;1.7348,1.0051,0;1.5273,3.9942,0;.6605,3.4926,0;2.2693,3.324,0;.8674,2.5126,0;-1.9554,2.6442,0;3.787,2.4528,0;1.7348,0,0;.8674,1.5126,0;.8674,-1.4976,0;2.6023,1.5026,0;6.3888,.9592,0;1.8666,2.4083,0;.4984,5.4098,0;5.0237,.5898,0;6.0194,2.3243,0;-1.0042,2.9527,0;4.6543,1.9549,0;5.5216,1.4571,0;-.4327,-.2506,0;-.4337,1.2538,0;1.8991,4.3285,0;.457,3.9493,0;2.563,3.7286,0;.3701,2.4607,0;-1.8011,2.1686,0;-2.1096,3.1198,0;-2.431,2.4899,0;4.036,2.8864,0;3.5381,2.0191,0;2.1675,-.2506,0;.7017,5.8666,0;5.2748,.1574,0;5.7683,2.7567,0;

Duplicates ChEBI44642

mol2_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.sdf

Formula	C₁₀H₁₅N₂O₉P
MW	338.21
InChIKey	FHMMECZNEPGJSJ-KRKNQDLHNA-N
Entry_Date	2023-11-01
Net_Charge	0
Number_Atoms	37
Number_Heavy_Atoms	22
Number_Rings	2
Number_Bonds	38
Rotat_Bonds	8
Unbranched_Chain	2
Chiral_Centers	4
ONatoms	11
HB_Donor	4
HB_Acceptor	6
OpenEye_HB_Donors	4
OpenEye_HB_Acceptors	6
Lipinski_HB_Donors	4
Lipinski_HB_Acceptors	11
Lipinski_Violations	1
XLogP3	0
XLogP	-2.6
logP	-2.0808
PSA	170.12
MR	69.9096
ABS	0.55
Solubility	highly
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-418.52614
PM7_Total_Energy_ev	-4639.29358
PM7_Electronic_Energy_ev	-31730.2471
PM7_Dipole_Debye	8.01907
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-9.859
PM7_LUMO_Energy_ev	-0.602
PM7_COSMO_Area_square_ang	301.93
PM7_COSMO_Volue_cubic_ang	344.34
PM7_Electron_Affinity_ev	0.602
PM7_Ionization_Energy_ev	9.859
PM7_Energy_Gap_ev	9.257
PM7_Global_Hardness_ev	4.6285
PM7_Global_Softness_ev	0.21605271686291455
PM7_Chemical_Potential_ev	-5.2305
PM7_Electronigativity_ev	5.2305
PM7_Back_Donation_Energy_ev	-1.157125
PM7_Electrophilicity_ev	2.955399184400994
OPENEYE_Name	[(2~{R},3~{R},4~{R},5~{R})-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-4-methoxy-tetrahydrofuran-2-yl]methyl dihydrogen phosphate
SMILES	c1cn(c(=O)[nH]c1=O)C2C(C(C(O2)COP(=O)(O)O)O)OC
Canonical_SMILES	CO[C@@H]1[C@H](O)[C@H](O[C@H]1n1ccc(=O)[nH]c1=O)COP(=O)(O)O
InChI	1/C10H15N2O9P/c1-19-8-7(14)5(4-20-22(16,17)18)21-9(8)12-3-2-6(13)11-10(12)15/h2-3,5,7-9,14H,4H2,1H3,(H,11,13,15)(H2,16,17,18)/f/h11,16-17H
InChI_3D	1S/C10H15N2O9P/c1-19-8-7(14)5(4-20-22(16,17)18)21-9(8)12-3-2-6(13)11-10(12)15/h2-3,5,7-9,14H,4H2,1H3,(H,11,13,15)(H2,16,17,18)/t5-,7-,8-,9-/m1/s1
AuxInfo	1/1/N:9,1,2,10,7,3,5,6,8,4,11,12,13,17,14,15,18,19,20,21,16,22/E:(16,17,18)/F:9,1,2,10,7,3,5,6,8,4,11,12,13,17,14,18,19,15,20,21,16,22/E:(16,17)/rA:37cCCCCCCCCCCNNOOOOOOOOOPHHHHHHHHHHHHHHH/rB:d1;s1;;;s5;s5;s6;;s7;s3s4;s2s4s8;d3;d4;;s7s8;s5;;;s6s9;s10;d15s18s19s21;s1;s2;s5;s6;s7;s8;s9;s9;s9;s10;s10;s11;s17;s18;s19;/rC:;0,1.0051,0;.8674,-.4976,0;1.7348,1.0051,0;1.5273,3.9942,0;.6605,3.4926,0;2.2693,3.324,0;.8674,2.5126,0;-1.9554,2.6442,0;3.787,2.4528,0;1.7348,0,0;.8674,1.5126,0;.8674,-1.4976,0;2.6023,1.5026,0;6.3888,.9592,0;1.8666,2.4083,0;.4984,5.4098,0;5.0237,.5898,0;6.0194,2.3243,0;-1.0042,2.9527,0;4.6543,1.9549,0;5.5216,1.4571,0;-.4327,-.2506,0;-.4337,1.2538,0;1.8991,4.3285,0;.457,3.9493,0;2.563,3.7286,0;.3701,2.4607,0;-1.8011,2.1686,0;-2.1096,3.1198,0;-2.431,2.4899,0;4.036,2.8864,0;3.5381,2.0191,0;2.1675,-.2506,0;.7017,5.8666,0;5.2748,.1574,0;5.7683,2.7567,0;
Duplicates	ChEBI44642
mol2_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000044500-0000044749/ChEBI44642.sdf