CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI27553_s0_p7 (7676)

Formula C₂₁H₄₂N₇O₁₇P₂

MW 726.55

InChIKey GAODGIPKEKRVEC-CMQFCTQGNA-M

Entry_Date 2023-11-01

Net_Charge -1

Number_Atoms 93

Number_Heavy_Atoms 47

Number_Rings 3

Number_Bonds 95

Rotat_Bonds 24

Unbranched_Chain 2

Chiral_Centers 15

ONatoms 24

HB_Donor 14

HB_Acceptor 11

OpenEye_HB_Donors 17

OpenEye_HB_Acceptors 15

Lipinski_HB_Donors 12

Lipinski_HB_Acceptors 24

Lipinski_Violations 3

XLogP3 0

XLogP -11.79

logP -5.0452

PSA 435.96

MR 155.197

ABS 0.17

Solubility highly

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -794.18284

PM7_Total_Energy_ev -9823.66644

PM7_Electronic_Energy_ev -121515.33807

PM7_Dipole_Debye 16.47633

PM7_Point_Group C1

PM7_HOMO_Energy_ev -4.882

PM7_LUMO_Energy_ev 1.595

PM7_COSMO_Area_square_ang 466.9

PM7_COSMO_Volue_cubic_ang 725.36

PM7_Electron_Affinity_ev -1.595

PM7_Ionization_Energy_ev 4.882

PM7_Energy_Gap_ev 6.477

PM7_Global_Hardness_ev 3.2385

PM7_Global_Softness_ev 0.3087849312953528

PM7_Chemical_Potential_ev -1.6435

PM7_Electronigativity_ev 1.6435

PM7_Back_Donation_Energy_ev -0.809625

PM7_Electrophilicity_ev 0.4170282924193299

OPENEYE_Name [(1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2,4-bis[[amino(azaniumylidene)methyl]amino]-5-[(2~{S},3~{R},4~{S},5~{S})-3-[(2~{S},3~{S},4~{S},5~{R},6~{S})-4,5-dihydroxy-6-(hydroxymethyl)-3-(methylammonio)tetrahydropyran-2-yl]oxy-5-methyl-4-(phosphonatooxymethyl)tetrahydrofuran-2-yl]oxy-3,6-dihydroxy-cyclohexyl] phosphate

SMILES C(=[NH2+])(N)NC1C(C(C(C(C1OC2C(C(C(O2)C)COP(=O)([O-])[O-])OC3C(C(C(C(O3)CO)O)O)[NH2+]C)O)OP(=O)([O-])[O-])NC(=[NH2+])N)O

Canonical_SMILES OC[C@@H]1O[C@@H](O[C@H]2[C@@H](O[C@H]([C@@H]2COP(=O)(O)O)C)O[C@@H]2[C@@H](NC(=[NH2])N)[C@H](O)[C@H]([C@@H]([C@@H]2O)OP(=O)(O)O)NC(=[NH2])N)[C@H]([C@@H]([C@H]1O)O)[NH2+]C

InChI 1/C21H43N7O17P2/c1-5-6(4-40-46(34,35)36)15(43-18-10(26-2)13(32)11(30)7(3-29)42-18)19(41-5)44-16-8(27-20(22)23)12(31)9(28-21(24)25)17(14(16)33)45-47(37,38)39/h5-19,26,29-33H,3-4H2,1-2H3,(H4,22,23,27)(H4,24,25,28)(H2,34,35,36)(H2,37,38,39)/p-1/fC21H42N7O17P2/h26-28H,22-25H2/q-1

InChI_3D 1S/C21H45N7O17P2/c1-5-6(4-40-46(34,35)36)15(43-18-10(26-2)13(32)11(30)7(3-29)42-18)19(41-5)44-16-8(27-20(22)23)12(31)9(28-21(24)25)17(14(16)33)45-47(37,38)39/h5-19,26-33H,3-4,22-25H2,1-2H3,(H2,34,35,36)(H2,37,38,39)/p+1/t5-,6-,7-,8-,9+,10-,11-,12-,13-,14+,15+,16+,17-,18-,19-/m0/s1

AuxInfo 1/1/N:18,19,21,20,14,3,15,4,5,6,13,8,11,12,7,9,10,16,17,1,2,22,24,23,25,28,26,27,37,36,33,34,35,30,40,41,29,38,39,45,31,32,42,43,44,47,46/E:(22,23)(24,25)(34,35,36)(37,38,39)/F:m/E:m/rA:89cCCCCCCCCCCCCCCCCCCCCCN+N+NNNNN+OOOOOOOOOO-O-O-O-OOOOPPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:;;;;;s3;s4s5;s4;s5;s6;s9s10;s11;s3;s13;s6;s7;s14;;s3;s15;d1;d2;s1;s2;s1s4;s2s5;s6s19;;;s14s17;s15s16;s8;s11;s12;s13;s21;;;;;s7s16;s9s17;s10;s20;d29s38s39s44;d30s40s41s45;s3;s4;s5;s6;s7;s8;s9;s10;s11;s12;s13;s14;s15;s16;s17;s18;s18;s18;s19;s19;s19;s20;s20;s21;s21;s22;s23;s24;s24;s25;s25;s26;s27;s28;s33;s34;s35;s36;s37;s22;s23;s28;/rC:-7.4232,4.5258,0;-5.6382,8.6511,0;-5.2404,.5097,0;-5.0127,4.5718,0;-5.081,6.3055,0;-.8675,.4975,0;-4.3131,.8882,0;-5.544,5.419,0;-4.0083,4.6114,0;-4.0766,6.345,0;;-3.5351,5.4982,0;.8675,.4975,0;-5.8838,1.275,0;.8675,1.5027,0;-.8675,1.5027,0;-4.3842,1.8872,0;-6.6749,1.8868,0;-1.5479,-1.3832,0;-4.4146,-1.0333,0;1.4725,3.1448,0;-7.2865,5.5164,0;-6.5634,8.2714,0;-8.3494,4.1488,0;-5.5045,9.6421,0;-6.6336,3.9121,0;-4.8469,8.0397,0;-1.2077,-.4429,0;-.6116,7.779,0;-7.0596,-2.4488,0;-5.3597,2.1271,0;0,2.0104,0;-6.2847,4.7473,0;1.1236,-1.3417,0;-2.1534,4.4243,0;2.5912,.7997,0;1.8182,4.0831,0;-1.918,8.3206,0;-1.1532,6.4726,0;-6.6498,-1.0953,0;-5.7061,-2.8587,0;-2.5903,1.1954,0;-4.2475,2.8778,0;-2.4596,7.0142,0;-5.2963,-1.5051,0;-1.5356,7.3966,0;-6.178,-1.977,0;-5.6544,.2293,0;-4.907,4.0831,0;-5.5575,6.4569,0;-1.36,.5838,0;-4.174,.4079,0;-5.9396,5.7247,0;-3.5327,4.4571,0;-4.1837,6.8334,0;-.321,-.3833,0;-3.1657,5.8352,0;1.0376,.0273,0;-6.2301,.9143,0;1.3597,1.4149,0;-1.0404,1.9719,0;-3.8844,1.8707,0;-6.369,2.2823,0;-7.0704,2.1926,0;-6.9808,1.4912,0;-1.0777,-1.5533,0;-2.0181,-1.2131,0;-1.718,-1.8534,0;-4.1787,-1.4741,0;-3.9738,-.7973,0;1.0033,3.3177,0;1.9417,2.9719,0;-6.8234,5.7049,0;-6.6303,7.7759,0;-8.7442,4.4556,0;-8.4177,3.6535,0;-5.9001,9.9478,0;-5.0419,9.8319,0;-6.7019,3.4168,0;-4.3843,8.2296,0;-.7375,-.613,0;-6.7608,4.9002,0;.9521,-1.8113,0;-1.6903,4.6127,0;2.9122,.4164,0;1.4983,4.4674,0;-7.6813,5.8232,0;-6.959,8.5771,0;-1.6779,-.2728,0;

Duplicates ChEBI27553_s0_p7

mol2_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.sdf

Formula	C₂₁H₄₂N₇O₁₇P₂
MW	726.55
InChIKey	GAODGIPKEKRVEC-CMQFCTQGNA-M
Entry_Date	2023-11-01
Net_Charge	-1
Number_Atoms	93
Number_Heavy_Atoms	47
Number_Rings	3
Number_Bonds	95
Rotat_Bonds	24
Unbranched_Chain	2
Chiral_Centers	15
ONatoms	24
HB_Donor	14
HB_Acceptor	11
OpenEye_HB_Donors	17
OpenEye_HB_Acceptors	15
Lipinski_HB_Donors	12
Lipinski_HB_Acceptors	24
Lipinski_Violations	3
XLogP3	0
XLogP	-11.79
logP	-5.0452
PSA	435.96
MR	155.197
ABS	0.17
Solubility	highly
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-794.18284
PM7_Total_Energy_ev	-9823.66644
PM7_Electronic_Energy_ev	-121515.33807
PM7_Dipole_Debye	16.47633
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-4.882
PM7_LUMO_Energy_ev	1.595
PM7_COSMO_Area_square_ang	466.9
PM7_COSMO_Volue_cubic_ang	725.36
PM7_Electron_Affinity_ev	-1.595
PM7_Ionization_Energy_ev	4.882
PM7_Energy_Gap_ev	6.477
PM7_Global_Hardness_ev	3.2385
PM7_Global_Softness_ev	0.3087849312953528
PM7_Chemical_Potential_ev	-1.6435
PM7_Electronigativity_ev	1.6435
PM7_Back_Donation_Energy_ev	-0.809625
PM7_Electrophilicity_ev	0.4170282924193299
OPENEYE_Name	[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2,4-bis[[amino(azaniumylidene)methyl]amino]-5-[(2~{S},3~{R},4~{S},5~{S})-3-[(2~{S},3~{S},4~{S},5~{R},6~{S})-4,5-dihydroxy-6-(hydroxymethyl)-3-(methylammonio)tetrahydropyran-2-yl]oxy-5-methyl-4-(phosphonatooxymethyl)tetrahydrofuran-2-yl]oxy-3,6-dihydroxy-cyclohexyl] phosphate
SMILES	C(=[NH2+])(N)NC1C(C(C(C(C1OC2C(C(C(O2)C)COP(=O)([O-])[O-])OC3C(C(C(C(O3)CO)O)O)[NH2+]C)O)OP(=O)([O-])[O-])NC(=[NH2+])N)O
Canonical_SMILES	OC[C@@H]1O[C@@H](O[C@H]2[C@@H](O[C@H]([C@@H]2COP(=O)(O)O)C)O[C@@H]2[C@@H](NC(=[NH2])N)[C@H](O)[C@H]([C@@H]([C@@H]2O)OP(=O)(O)O)NC(=[NH2])N)[C@H]([C@@H]([C@H]1O)O)[NH2+]C
InChI	1/C21H43N7O17P2/c1-5-6(4-40-46(34,35)36)15(43-18-10(26-2)13(32)11(30)7(3-29)42-18)19(41-5)44-16-8(27-20(22)23)12(31)9(28-21(24)25)17(14(16)33)45-47(37,38)39/h5-19,26,29-33H,3-4H2,1-2H3,(H4,22,23,27)(H4,24,25,28)(H2,34,35,36)(H2,37,38,39)/p-1/fC21H42N7O17P2/h26-28H,22-25H2/q-1
InChI_3D	1S/C21H45N7O17P2/c1-5-6(4-40-46(34,35)36)15(43-18-10(26-2)13(32)11(30)7(3-29)42-18)19(41-5)44-16-8(27-20(22)23)12(31)9(28-21(24)25)17(14(16)33)45-47(37,38)39/h5-19,26-33H,3-4,22-25H2,1-2H3,(H2,34,35,36)(H2,37,38,39)/p+1/t5-,6-,7-,8-,9+,10-,11-,12-,13-,14+,15+,16+,17-,18-,19-/m0/s1
AuxInfo	1/1/N:18,19,21,20,14,3,15,4,5,6,13,8,11,12,7,9,10,16,17,1,2,22,24,23,25,28,26,27,37,36,33,34,35,30,40,41,29,38,39,45,31,32,42,43,44,47,46/E:(22,23)(24,25)(34,35,36)(37,38,39)/F:m/E:m/rA:89cCCCCCCCCCCCCCCCCCCCCCN+N+NNNNN+OOOOOOOOOO-O-O-O-OOOOPPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:;;;;;s3;s4s5;s4;s5;s6;s9s10;s11;s3;s13;s6;s7;s14;;s3;s15;d1;d2;s1;s2;s1s4;s2s5;s6s19;;;s14s17;s15s16;s8;s11;s12;s13;s21;;;;;s7s16;s9s17;s10;s20;d29s38s39s44;d30s40s41s45;s3;s4;s5;s6;s7;s8;s9;s10;s11;s12;s13;s14;s15;s16;s17;s18;s18;s18;s19;s19;s19;s20;s20;s21;s21;s22;s23;s24;s24;s25;s25;s26;s27;s28;s33;s34;s35;s36;s37;s22;s23;s28;/rC:-7.4232,4.5258,0;-5.6382,8.6511,0;-5.2404,.5097,0;-5.0127,4.5718,0;-5.081,6.3055,0;-.8675,.4975,0;-4.3131,.8882,0;-5.544,5.419,0;-4.0083,4.6114,0;-4.0766,6.345,0;;-3.5351,5.4982,0;.8675,.4975,0;-5.8838,1.275,0;.8675,1.5027,0;-.8675,1.5027,0;-4.3842,1.8872,0;-6.6749,1.8868,0;-1.5479,-1.3832,0;-4.4146,-1.0333,0;1.4725,3.1448,0;-7.2865,5.5164,0;-6.5634,8.2714,0;-8.3494,4.1488,0;-5.5045,9.6421,0;-6.6336,3.9121,0;-4.8469,8.0397,0;-1.2077,-.4429,0;-.6116,7.779,0;-7.0596,-2.4488,0;-5.3597,2.1271,0;0,2.0104,0;-6.2847,4.7473,0;1.1236,-1.3417,0;-2.1534,4.4243,0;2.5912,.7997,0;1.8182,4.0831,0;-1.918,8.3206,0;-1.1532,6.4726,0;-6.6498,-1.0953,0;-5.7061,-2.8587,0;-2.5903,1.1954,0;-4.2475,2.8778,0;-2.4596,7.0142,0;-5.2963,-1.5051,0;-1.5356,7.3966,0;-6.178,-1.977,0;-5.6544,.2293,0;-4.907,4.0831,0;-5.5575,6.4569,0;-1.36,.5838,0;-4.174,.4079,0;-5.9396,5.7247,0;-3.5327,4.4571,0;-4.1837,6.8334,0;-.321,-.3833,0;-3.1657,5.8352,0;1.0376,.0273,0;-6.2301,.9143,0;1.3597,1.4149,0;-1.0404,1.9719,0;-3.8844,1.8707,0;-6.369,2.2823,0;-7.0704,2.1926,0;-6.9808,1.4912,0;-1.0777,-1.5533,0;-2.0181,-1.2131,0;-1.718,-1.8534,0;-4.1787,-1.4741,0;-3.9738,-.7973,0;1.0033,3.3177,0;1.9417,2.9719,0;-6.8234,5.7049,0;-6.6303,7.7759,0;-8.7442,4.4556,0;-8.4177,3.6535,0;-5.9001,9.9478,0;-5.0419,9.8319,0;-6.7019,3.4168,0;-4.3843,8.2296,0;-.7375,-.613,0;-6.7608,4.9002,0;.9521,-1.8113,0;-1.6903,4.6127,0;2.9122,.4164,0;1.4983,4.4674,0;-7.6813,5.8232,0;-6.959,8.5771,0;-1.6779,-.2728,0;
Duplicates	ChEBI27553_s0_p7
mol2_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000000000-0000049999/Compound-0000027500-0000027749/ChEBI27553_s0_p7.sdf