CompChem-Database: compound details

CompChem-Database: details for selected entry

ChEBI184534_s0_p0_t1 (99236)

Formula C₂₁H₃₇N₂O₆S

MW 445.59

InChIKey DYMGJCHVJRXQGM-XJLJHZDFNA-M

Entry_Date 2023-11-01

Net_Charge -1

Number_Atoms 69

Number_Heavy_Atoms 30

Number_Rings 0

Number_Bonds 68

Rotat_Bonds 21

Unbranched_Chain 8

Chiral_Centers 3

ONatoms 8

HB_Donor 3

HB_Acceptor 6

OpenEye_HB_Donors 3

OpenEye_HB_Acceptors 6

Lipinski_HB_Donors 1

Lipinski_HB_Acceptors 8

Lipinski_Violations 0

XLogP3 0

XLogP 3.16

logP 4.2937

PSA 173.36

MR 125.792

ABS 0.55

Solubility very

Aggregator Pass

PM7_Heat_of_Formation_kcal_per_mol -238.18583

PM7_Total_Energy_ev -5399.34811

PM7_Electronic_Energy_ev -44603.65537

PM7_Dipole_Debye 39.27747

PM7_Point_Group C1

PM7_HOMO_Energy_ev -4.518

PM7_LUMO_Energy_ev -0.117

PM7_COSMO_Area_square_ang 500.64

PM7_COSMO_Volue_cubic_ang 576.6

PM7_Electron_Affinity_ev 0.117

PM7_Ionization_Energy_ev 4.518

PM7_Energy_Gap_ev 4.401

PM7_Global_Hardness_ev 2.2005

PM7_Global_Softness_ev 0.4544421722335833

PM7_Chemical_Potential_ev -2.3175

PM7_Electronigativity_ev 2.3175

PM7_Back_Donation_Energy_ev -0.550125

PM7_Electrophilicity_ev 1.2203604294478527

OPENEYE_Name (~{E},9~{S},10~{R})-10-[(2~{R})-2-azaniumyl-2-carboxylato-ethyl]sulfanyl-9-nitro-octadec-11-enoate

SMILES C(=CC(C(CCCCCCCC(=O)[O-])N(=O)=O)SCC(C(=O)[O-])[NH3+])CCCCCC

Canonical_SMILES CCCCCC/C=C/[C@H]([C@@H](N(=O)=O)CCCCCCCC(=O)O)SC[C@@H](C(=O)O)[NH3+]

InChI 1/C21H38N2O6S/c1-2-3-4-5-8-11-14-19(30-16-17(22)21(26)27)18(23(28)29)13-10-7-6-9-12-15-20(24)25/h11,14,17-19H,2-10,12-13,15-16,22H2,1H3,(H,24,25)(H,26,27)/p-1/fC21H37N2O6S/h22H/q-1

InChI_3D 1S/C21H38N2O6S/c1-2-3-4-5-8-11-14-19(30-16-17(22)21(26)27)18(23(28)29)13-10-7-6-9-12-15-20(24)25/h11,14,17-19H,2-10,12-13,15-16,22H2,1H3,(H,24,25)(H,26,27)/p+1/b14-11+/t17-,18-,19+/m0/s1

AuxInfo 1/1/N:5,8,11,12,9,14,15,6,13,16,1,10,17,2,7,18,20,21,19,3,4,23,22,24,26,25,27,28,29,30/E:(24,25)(26,27)(28,29)/F:m/E:m/CRV:23.5/rA:67cCCCCCCCCCCCCCCCCCCCCCNN+O-O-OOOOSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:w1;;;;s1;s3;s5;s6;s7;s8;s9s11;s10;s13;s14;s15;s16;;s2;s4s18;s17s19;s21;s20;s3;s4;d3;d4;d22;d22;s18s19;s1;s2;s5;s5;s5;s6;s6;s7;s7;s8;s8;s9;s9;s10;s10;s11;s11;s12;s12;s13;s13;s14;s14;s15;s15;s16;s16;s17;s17;s18;s18;s19;s20;s21;s23;s23;s23;/rC:;-.5,-.866,0;4.5,-9.5263,0;3.0981,-1.0981,0;-3,5.1962,0;-.5,.866,0;4,-8.6603,0;-2.5,4.3301,0;-1,1.7321,0;3.5,-7.7942,0;-2,3.4641,0;-1.5,2.5981,0;3,-6.9282,0;2.5,-6.0622,0;2,-5.1962,0;1.5,-4.3301,0;1,-3.4641,0;1.7321,-.7321,0;0,-1.7321,0;2.5981,-.2321,0;.5,-2.5981,0;-.366,-3.0981,0;3.4641,.2679,0;5.5,-9.5263,0;4.0981,-1.0981,0;4,-10.3923,0;2.5981,-1.9641,0;-.366,-4.0981,0;-1.2321,-2.5981,0;.866,-1.2321,0;.5,0,0;-1,-.866,0;-2.567,5.4462,0;-3.433,4.9462,0;-3.25,5.6292,0;-.933,.616,0;-.067,1.116,0;3.567,-8.9103,0;4.433,-8.4103,0;-2.933,4.0801,0;-2.067,4.5801,0;-.567,1.9821,0;-1.433,1.4821,0;3.067,-8.0442,0;3.933,-7.5442,0;-2.433,3.2141,0;-1.567,3.7141,0;-1.067,2.8481,0;-1.933,2.3481,0;2.567,-7.1782,0;3.433,-6.6782,0;2.067,-6.3122,0;2.933,-5.8122,0;1.567,-5.4462,0;2.433,-4.9462,0;1.067,-4.5801,0;1.933,-4.0801,0;.567,-3.7141,0;1.433,-3.2141,0;1.9821,-1.1651,0;1.4821,-.299,0;-.433,-1.9821,0;2.3481,.201,0;.933,-2.3481,0;3.2141,.701,0;3.7141,-.1651,0;3.8971,.5179,0;

Duplicates ChEBI184534_s0_p0_t1;ChEBI184534_s0_p7_t0;ChEBI184534_s0_p7_t1

mol2_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.mol2

pdbqt_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.pdbqt

sdf_Path /CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.sdf

Formula	C₂₁H₃₇N₂O₆S
MW	445.59
InChIKey	DYMGJCHVJRXQGM-XJLJHZDFNA-M
Entry_Date	2023-11-01
Net_Charge	-1
Number_Atoms	69
Number_Heavy_Atoms	30
Number_Rings	0
Number_Bonds	68
Rotat_Bonds	21
Unbranched_Chain	8
Chiral_Centers	3
ONatoms	8
HB_Donor	3
HB_Acceptor	6
OpenEye_HB_Donors	3
OpenEye_HB_Acceptors	6
Lipinski_HB_Donors	1
Lipinski_HB_Acceptors	8
Lipinski_Violations	0
XLogP3	0
XLogP	3.16
logP	4.2937
PSA	173.36
MR	125.792
ABS	0.55
Solubility	very
Aggregator	Pass
PM7_Heat_of_Formation_kcal_per_mol	-238.18583
PM7_Total_Energy_ev	-5399.34811
PM7_Electronic_Energy_ev	-44603.65537
PM7_Dipole_Debye	39.27747
PM7_Point_Group	C1
PM7_HOMO_Energy_ev	-4.518
PM7_LUMO_Energy_ev	-0.117
PM7_COSMO_Area_square_ang	500.64
PM7_COSMO_Volue_cubic_ang	576.6
PM7_Electron_Affinity_ev	0.117
PM7_Ionization_Energy_ev	4.518
PM7_Energy_Gap_ev	4.401
PM7_Global_Hardness_ev	2.2005
PM7_Global_Softness_ev	0.4544421722335833
PM7_Chemical_Potential_ev	-2.3175
PM7_Electronigativity_ev	2.3175
PM7_Back_Donation_Energy_ev	-0.550125
PM7_Electrophilicity_ev	1.2203604294478527
OPENEYE_Name	(~{E},9~{S},10~{R})-10-[(2~{R})-2-azaniumyl-2-carboxylato-ethyl]sulfanyl-9-nitro-octadec-11-enoate
SMILES	C(=CC(C(CCCCCCCC(=O)[O-])N(=O)=O)SCC(C(=O)[O-])[NH3+])CCCCCC
Canonical_SMILES	CCCCCC/C=C/[C@H]([C@@H](N(=O)=O)CCCCCCCC(=O)O)SC[C@@H](C(=O)O)[NH3+]
InChI	1/C21H38N2O6S/c1-2-3-4-5-8-11-14-19(30-16-17(22)21(26)27)18(23(28)29)13-10-7-6-9-12-15-20(24)25/h11,14,17-19H,2-10,12-13,15-16,22H2,1H3,(H,24,25)(H,26,27)/p-1/fC21H37N2O6S/h22H/q-1
InChI_3D	1S/C21H38N2O6S/c1-2-3-4-5-8-11-14-19(30-16-17(22)21(26)27)18(23(28)29)13-10-7-6-9-12-15-20(24)25/h11,14,17-19H,2-10,12-13,15-16,22H2,1H3,(H,24,25)(H,26,27)/p+1/b14-11+/t17-,18-,19+/m0/s1
AuxInfo	1/1/N:5,8,11,12,9,14,15,6,13,16,1,10,17,2,7,18,20,21,19,3,4,23,22,24,26,25,27,28,29,30/E:(24,25)(26,27)(28,29)/F:m/E:m/CRV:23.5/rA:67cCCCCCCCCCCCCCCCCCCCCCNN+O-O-OOOOSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH/rB:w1;;;;s1;s3;s5;s6;s7;s8;s9s11;s10;s13;s14;s15;s16;;s2;s4s18;s17s19;s21;s20;s3;s4;d3;d4;d22;d22;s18s19;s1;s2;s5;s5;s5;s6;s6;s7;s7;s8;s8;s9;s9;s10;s10;s11;s11;s12;s12;s13;s13;s14;s14;s15;s15;s16;s16;s17;s17;s18;s18;s19;s20;s21;s23;s23;s23;/rC:;-.5,-.866,0;4.5,-9.5263,0;3.0981,-1.0981,0;-3,5.1962,0;-.5,.866,0;4,-8.6603,0;-2.5,4.3301,0;-1,1.7321,0;3.5,-7.7942,0;-2,3.4641,0;-1.5,2.5981,0;3,-6.9282,0;2.5,-6.0622,0;2,-5.1962,0;1.5,-4.3301,0;1,-3.4641,0;1.7321,-.7321,0;0,-1.7321,0;2.5981,-.2321,0;.5,-2.5981,0;-.366,-3.0981,0;3.4641,.2679,0;5.5,-9.5263,0;4.0981,-1.0981,0;4,-10.3923,0;2.5981,-1.9641,0;-.366,-4.0981,0;-1.2321,-2.5981,0;.866,-1.2321,0;.5,0,0;-1,-.866,0;-2.567,5.4462,0;-3.433,4.9462,0;-3.25,5.6292,0;-.933,.616,0;-.067,1.116,0;3.567,-8.9103,0;4.433,-8.4103,0;-2.933,4.0801,0;-2.067,4.5801,0;-.567,1.9821,0;-1.433,1.4821,0;3.067,-8.0442,0;3.933,-7.5442,0;-2.433,3.2141,0;-1.567,3.7141,0;-1.067,2.8481,0;-1.933,2.3481,0;2.567,-7.1782,0;3.433,-6.6782,0;2.067,-6.3122,0;2.933,-5.8122,0;1.567,-5.4462,0;2.433,-4.9462,0;1.067,-4.5801,0;1.933,-4.0801,0;.567,-3.7141,0;1.433,-3.2141,0;1.9821,-1.1651,0;1.4821,-.299,0;-.433,-1.9821,0;2.3481,.201,0;.933,-2.3481,0;3.2141,.701,0;3.7141,-.1651,0;3.8971,.5179,0;
Duplicates	ChEBI184534_s0_p0_t1;ChEBI184534_s0_p7_t0;ChEBI184534_s0_p7_t1
mol2_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.mol2
pdbqt_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.pdbqt
sdf_Path	/CCDB/ChEBI/Database/Compound-0000150000-0000199999/Compound-0000184500-0000184749/ChEBI184534_s0_p0_t1.sdf